mr_rt [search mol] [initial rotation] [initial translation]
When this command is activated, the user is asked to identify an atom in the molecule that is going to be rotated/translated. When that is done, the user can input initial values for the eulerean angles. These are given in degrees. The initial translation can be given in fractional Å.
The dials then become active, and the eulerian angles and fractional translation can be dialed in. The current values are shown on the screen. The Yes command will apply the transformation operator to the coordinates, and the No command will keep the original coordinates. If you accept the new coordinates, and reactivate MR_rt, the eulerian angles will be relative to the newly accepted coordinates, so be careful.
O > mr_rt O > MR> Angle convention: X-PLOR MR> Search molecule: HCAC MR> Object: HCAC MR> Define initial eulerian angles [ 315.60 39.60 0.00]: 0 0 0 MR> Define initial translation (fractional) [ 0.00 0.00 0.00]: MR> Dials are now active... O > O > no MR> Original coordinates restored. O >